PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_02210
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 194aa    MW: 21576.9 Da    PI: 4.3342
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_02210genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-191262155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr++  +g+WvAeIr+p   + r kr +lg+f ta +Aa a+++a+ +++g
  PEQU_02210 12 CSYRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFPTALMAAHAYDQAATAMYG 62
                67*****999.**********8...3.35**********************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.29E-291270No hitNo description
PfamPF008472.5E-141262IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-321371IPR001471AP2/ERF domain
PROSITE profilePS5103222.551370IPR001471AP2/ERF domain
SuperFamilySSF541715.04E-221371IPR016177DNA-binding domain
SMARTSM003808.7E-361376IPR001471AP2/ERF domain
PRINTSPR003672.3E-91425IPR001471AP2/ERF domain
PRINTSPR003672.3E-93652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MRGKGGPENS KCSYRGVRQR TWGKWVAEIR EPNRGKRLWL GTFPTALMAA HAYDQAATAM  60
YGPAARLNFP TNQTAASPSE SYGSTITTTN YSIGSADLMD CAKREENVEL AEWLNLAGDL  120
SSENFDVDEL LRMMDADPGN NGLSTEAAQN LDGEMLRGLE NQNYFIWPTR QELDYWPAGN  180
PEFFEPGFSD GVLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-161470663ATERF1
3gcc_A6e-161470663ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010931300.13e-43PREDICTED: dehydration-responsive element-binding protein 2C-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP73153551
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.23e-36DRE-binding protein 2A